This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_0002GTT.1

LOC_0002GTT.1
S. A. Sanders, L. J. Herrero, K. McPhie, S. S. Chow, M. E. Craig, D. E. Dwyer, W. Rawlinson & P. C. McMinn

Telethon Institute for Child Health Research, Virology

Sample details

Earliest release date
2005-12-15
Isolate name
1065-SYD-94

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2005-12-15
NCBI update date
2016-07-26
INSDC accession

Submission details

Submission ID
AY722909.1
Submitting group
Date submitted
2026-07-17 10:32:17 UTC
Date released
2026-07-17 10:33:22 UTC

Clade

Clade EV-A71
C1

Genotype

Genotype
EV-A71

Alignment and QC

Total SNPs
160
Length
891 (12%)

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions
  • G2441A
  • C2444T
  • A2447G
  • A2453G
  • C2468T
  • A2477G
  • A2491G
  • G2492A
  • C2495T
  • C2503A
  • T2513G
  • C2527A
  • A2528G
  • G2529A
  • C2531T
  • C2534G
  • T2546C
  • T2549C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the U22521.1 reference

Substitutions

VP1

  • VP1:K18R
  • VP1:P22Q
  • VP1:P30Q
  • VP1:D31N
  • VP1:K98E
  • VP1:R145Q
  • VP1:D167E
  • VP1:P172Q
  • VP1:S183L
  • VP1:S240T
  • VP1:S241M
  • VP1:E244K
  • VP1:S246P
  • VP1:I262V
  • VP1:S275A
  • VP1:D282N
  • VP1:T289A
Deletions
N/A
Insertions
N/A

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