This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_001J2PF.1

China/LOC_001J2PF.1/2018-01
X. Yao & L. Chen

Shenzhen Center for Disease Control and Prevention, Institute of Pathogen Biology

Sample details

Collection date
2018-01
Earliest release date
2026-04-18
Sampling location
China
Isolate name
CVA10/SZ178/CHN/2018

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-05-09 06:43insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2026-04-18
NCBI update date
2026-04-18
INSDC accession

Host

Host

Submission details

Submission ID
PX912035.1
Submitting group
Date submitted
2026-05-09 06:42:36 UTC
Date released
2026-05-09 07:19:20 UTC

Clade

Clade CV-A10
C

Genotype

Genotype
CV-A10

Alignment and QC

Total SNPs
208
Length
894 (12.1%)

Nucleotide mutations

Mutations called relative to the AY421767.1 reference

Substitutions

  • C2445T
  • C2454T
  • C2457A
  • C2460T
  • C2463T
  • T2470C
  • A2473G
  • C2475A
  • G2477A
  • C2478T
  • T2481A
  • T2483C
  • G2487T
  • C2488A
  • G2490A
  • C2493T
  • A2496T
  • C2498G
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the AY421767.1 reference

Substitutions

VP1

  • VP1:S13G
  • VP1:S14N
  • VP1:V16A
  • VP1:T21S
  • VP1:G23V
  • VP1:Q24T
  • VP1:D25N
  • VP1:N27E
  • VP1:T28S
  • VP1:G31N
  • VP1:A33T
  • VP1:M70I
  • VP1:A78T
  • VP1:S81N
  • VP1:V107T
  • VP1:F148Y
  • VP1:Q223L
  • VP1:V240E
Deletions
N/A
Insertions
N/A

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