This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_001HAQ7.1

Turkey/LOC_001HAQ7.1/2014
G. Akyildiz, S. Kar & R. Bircan

Namik Kemal University, Department of Biology

Sample details

Collection date
2014
Earliest release date
2020-03-16
Sampling location
Turkey (Kirklareli)
Isolate name
GASK-NKU-HM057

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2020-03-16
INSDC accession S segment

Host

Host

Submission details

Submission ID
MN398290.1.S
Submitting group
Date submitted
2026-07-20 10:41:01 UTC
Date released
2026-07-20 10:43:49 UTC

Clade & Lineage

Closest reference S segment
S1 (OL774851.1) (variant)

Files

Annotations

Alignment and QC

Total SNPs S segment
28
Length S segment
172 (9.52%)

Nucleotide mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

S segment

  • G282T
  • T288C
  • C294T
  • A309G
  • A315G
  • A321G
  • A333G
  • G337T
  • G339A
  • C342A
  • T348C
  • G351A
  • A363G
  • G365A
  • T366C
  • A370G
  • T372A
  • A378G
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3 & OL774851.1 references

Substitutions

NP

  • NP:A100S
  • NP:S109N
  • NP:T111A
  • NP:K135E
Deletions
N/A
Insertions
N/A

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