This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_001GLHE.1

Display Name: Turkey/LOC_001GLHE.1/2015
M. O. Timurkan & H. Aydin

Sample details

Collection date
2015
Collection date (lower bound)
2015-01-01
Collection date (upper bound)
2015-12-31
Earliest release date
2020-03-28
Collection country
Turkey
Isolate name
TR/BAYBURT2014/OHE/22/S

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-02-13 18:06insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Ataturk University, Faculty of Veterinary Medicine, Department of Virology

INSDC

NCBI release date
2020-03-28
INSDC accession S

Host

Host taxon id
Host name scientific
Homo sapiens

Alignment and QC metrics S

Length S
333
Total SNPs S
53
Total inserted nucs S
0
Total deleted nucs S
0
Total ambiguous nucs S
0
Total unknown nucs S
0
Total frame shifts S
0
Completeness S
18.44%
Total stop codons S
0

Submission details

Submission ID
MT178290.1.S
Submitting group
Date submitted
2026-02-13 18:06:39 UTC
Date released
2026-02-13 18:09:50 UTC

Files

Annotations

Nucleotide mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

S

  • S:A321G
  • S:A332G
  • S:A333G
  • S:G337T
  • S:G339A
  • S:C342G
  • S:T348C
  • S:G351A
  • S:A363G
  • S:G365A
  • S:T366C
  • S:A370G
  • S:C371T
  • S:T372A
  • S:A374T
  • S:A378G
  • S:A381G
  • S:C390T
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_005301.3 & OL774851.1 references

    Substitutions

    NP

  • NP:K98R
  • NP:A100S
  • NP:S109N
  • NP:T111V
  • NP:E112V
  • NP:Q179L
  • NP:D199E
    • Deletions
    None
    Insertions
    None

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