This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_001GB6C.1

Kazakhstan/LOC_001GB6C.1/2015
P. Deryabin, B. Atshabar, Y. Sansyzbaev, V. Berezin, T. Nurmakhanov, O. Yeskhojayev, A. Vilkova, A. Shevtsov, R. Hewson & B. Atkinson

Public Health England, Research

Sample details

Collection date
2015
Earliest release date
2016-04-30
Sampling location
Kazakhstan (Maktaaral district)
Isolate name
tick pool #80

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-05 16:08insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2016-04-30
INSDC accession S

Submission details

Submission ID
KX096700.1.S
Submitting group
Date submitted
2026-03-05 16:08:33 UTC
Date released
2026-03-05 16:11:24 UTC

Host

Host

Files

Annotations

Alignment and QC

Total SNPs S
66
Total ambiguous nucs S
3
Length S
501 (27.6%)
Variant S
False

Nucleotide mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

S segment

  • T141C
  • C150T
  • T165C
  • T166C
  • A173G
  • C183T
  • A186G
  • T204C
  • C225T
  • C228T
  • T234A
  • G246A
  • A252C
  • T261C
  • T267C
  • T273C
  • G282C
  • A309G
Deletions
N/A
Insertions
N/A

Amino acid mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

NP

  • NP:K45R
  • NP:D116E
  • NP:N150H
  • NP:Q179L
Deletions
N/A
Insertions
N/A

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