This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_001GAB3.1

China/LOC_001GAB3.1
M. Saijo, Q. Tang, B. Shimayi, L. Han, Y. Zhang, M. Asiguma, D. Tianshu, A. Maeda, I. Kurane & S. Morikawa

Department of Virology 1; 4-7-1 Gakuen, Musashimurayama, Tokyo 208-0011

Sample details

Earliest release date
2006-03-01
Sampling location
China (Xinjiang Uygur Autonomous Region)
Isolate name
XJ01Pt71

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2006-03-01
INSDC accession S segment

Host

Host

Submission details

Submission ID
AB209940.1.S
Submitting group
Date submitted
2026-09-09 16:37:06 UTC
Date released
2026-09-09 16:37:37 UTC

Clade & Lineage

Closest reference S segment
S1 (OL774851.1) (variant)

Files

Annotations

Alignment and QC

Total SNPs S segment
35
Length S segment
220 (12.2%)

Nucleotide mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

S segment

  • A309G
  • A315G
  • T318G
  • A321G
  • G330A
  • A333G
  • G339A
  • C342A
  • G351A
  • T366C
  • T369C
  • T372G
  • A378G
  • T387A
  • A393T
  • A405G
  • A412G
  • A413G
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3 & OL774851.1 references

Substitutions

NP

  • NP:D116E
  • NP:N125G
  • NP:N150H
Deletions
N/A
Insertions
N/A

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