This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_001G5JT.1

Display Name: Albania/LOC_001G5JT.1/2014-08-20
A. Papa, E. Velo, P. Kadiaj, K. Tsioka, A. Kontana, M. Kota & S. Bino

Sample details

Collection date
2014-08-20
Collection date (lower bound)
2014-08-20
Collection date (upper bound)
2014-08-20
Earliest release date
2017-09-02
Collection country
Albania
Isolate name
ALB-5/2014

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-02-13 18:06insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Aristotle University of Thessaloniki, A' Dept. of Microbiology

INSDC

NCBI release date
2017-09-02
INSDC accession S

Host

Host taxon id
Host name scientific
Rhipicephalus bursa

Alignment and QC metrics S

Length S
220
Total SNPs S
21
Total inserted nucs S
0
Total deleted nucs S
0
Total ambiguous nucs S
0
Total unknown nucs S
0
Total frame shifts S
0
Completeness S
13.10%
Total stop codons S
0

Submission details

Submission ID
MF612178.1.S
Submitting group
Date submitted
2026-02-13 18:06:39 UTC
Date released
2026-02-13 18:09:50 UTC

Files

Annotations

Nucleotide mutations

Mutations called relative to the NC_005301.3 & MK299338.1 references

Substitutions

S

  • S:T309C
  • S:A315C
  • S:T333G
  • S:C342T
  • S:A348G
  • S:C363T
  • S:T367A
  • S:C384T
  • S:A420G
  • S:C423T
  • S:C429T
  • S:T432C
  • S:T447C
  • S:A456G
  • S:T474C
  • S:A483G
  • S:G492A
  • S:T496C
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_005301.3 & MK299338.1 references

    Substitutions

    NP

  • NP:S105T
  • NP:A154T
    • Deletions
    None
    Insertions
    None

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