This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_001G2UA.1

Armenia/LOC_001G2UA.1/2023
A. Zhirova, Y. Lisitskaya, A. Volynkina, A. Manucharyan & G. Melik-Andreasyan

Stavropol State Research Anti-Plague Institute, Laboratory for diagnostics of viral infections

Sample details

Collection date
2023
Earliest release date
2025-03-05
Sampling location
Armenia
Isolate name
521-ARM-TI-2023

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2025-03-05
INSDC accession L

Host

Host

Submission details

Submission ID
PV105952.1.L
Submitting group
Date submitted
2026-10-05 18:03:13 UTC
Date released
2026-10-05 18:07:43 UTC

Files

Annotations

Alignment and QC

Total SNPs L
1238
Length L
11838 (97.8%)

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

L

  • A91G
  • G93A
  • C100T
  • A109G
  • T131A
  • C148T
  • T151C
  • T154C
  • T160C
  • T163C
  • T202C
  • C205T
  • C228T
  • T229C
  • A240C
  • T241C
  • T253C
  • T254A
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

RdRp

  • RdRp:S6N
  • RdRp:S19T
  • RdRp:P51L
  • RdRp:D55A
  • RdRp:Y60N
  • RdRp:R63H
  • RdRp:S67L
  • RdRp:R80K
  • RdRp:M172V
  • RdRp:R174K
  • RdRp:A202V
  • RdRp:S205P
  • RdRp:N206Y
  • RdRp:K218R
  • RdRp:I223L
  • RdRp:K275R
  • RdRp:I279V
  • RdRp:V352I
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue