This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_001FY7R.1

Display Name: Turkey/LOC_001FY7R.1/2014
F. Bayrakdar & D. Yagci Caglayik

Sample details

Collection date
2014
Collection date (lower bound)
2014-01-01
Collection date (upper bound)
2014-12-31
Earliest release date
2015-12-09
Collection country
Turkey
Isolate name
Turkey/Zile01/2014

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-02-13 18:06insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Public Health Institution of Turkey, Virology

INSDC

NCBI release date
2015-12-09
INSDC accession M

Host

Host taxon id
Host name scientific
Homo sapiens

Alignment and QC metrics M

Length M
518
Total SNPs M
81
Total inserted nucs M
0
Total deleted nucs M
0
Total ambiguous nucs M
0
Total unknown nucs M
0
Total frame shifts M
0
Completeness M
9.49%
Total stop codons M
0

Submission details

Submission ID
KT266835.1.M
Submitting group
Date submitted
2026-02-13 18:06:39 UTC
Date released
2026-02-13 18:08:24 UTC

Files

Annotations

Nucleotide mutations

Mutations called relative to the NC_005301.3 & MH396653.1 references

Substitutions

M

  • M:A4612G
  • M:G4613C
  • M:T4615G
  • M:C4618T
  • M:C4624T
  • M:T4630C
  • M:C4639T
  • M:C4648T
  • M:A4660G
  • M:T4672C
  • M:A4685G
  • M:A4690T
  • M:A4709G
  • M:G4714A
  • M:C4720T
  • M:A4723G
  • M:A4726G
  • M:T4738A
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_005301.3 & MH396653.1 references

    Substitutions

    GPC

  • GPC:A1509P
  • GPC:K1533E
  • GPC:E1534D
  • GPC:N1541D
  • GPC:N1564D
  • GPC:G1590S
  • GPC:I1591V
  • GPC:V1595L
  • GPC:F1600L
  • GPC:T1601L
  • GPC:T1604A
  • GPC:I1607V
  • GPC:I1610V
  • GPC:R1618K
  • GPC:K1648R
  • GPC:N1655S
  • GPC:E1666D
    • Deletions
    None
    Insertions
    None

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