This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_001FNAV.1

Turkey/LOC_001FNAV.1/2015_TO_2017
M. O. Timurkan & H. Aydin

Ataturk University, Faculty of Veterinary Medicine, Departmet of Virology

Sample details

Collection date
2015/2017
Earliest release date
2020-03-28
Sampling location
Turkey
Isolate name
TR/ERZURUM2014/OHE/19/M

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2020-03-28
INSDC accession M

Host

Host

Submission details

Submission ID
MT178325.1.M
Submitting group
Date submitted
2026-10-05 18:03:13 UTC
Date released
2026-10-05 18:06:37 UTC

Files

Annotations

Alignment and QC

Total SNPs M
77
Length M
422 (7.86%)

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

M

  • C4671T
  • T4676C
  • A4678G
  • A4694T
  • C4697T
  • A4713G
  • G4725C
  • A4730G
  • A4736G
  • T4742A
  • T4743C
  • G4745A
  • C4748T
  • A4751G
  • G4757A
  • T4763A
  • C4769T
  • A4778G
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

GPC

  • GPC:H1527Y
  • GPC:K1529R
  • GPC:E1534D
  • GPC:N1541D
  • GPC:E1545Q
  • GPC:S1564D
  • GPC:K1569R
  • GPC:S1589G
  • GPC:G1590S
  • GPC:I1591V
  • GPC:V1595F
  • GPC:M1597I
  • GPC:F1600L
  • GPC:I1607V
  • GPC:I1610V
  • GPC:R1618K
  • GPC:K1652R
  • GPC:N1655S
  • GPC:K1661R
Deletions
N/A
Insertions
N/A

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