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Crimean-Congo Hemorrhagic Fever Virus
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Crimean-Congo Hemorrhagic Fever Virus
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LOC_001FMDQ.1
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Download FASTA
Download metadata TSV
Display Name: Russia/LOC_001FMDQ.1/2014
A. Volynkina,
A. Burlachenko,
Y. Lisitskaya &
E. Kotenev
Sample details
Collection date
2014
Collection date (lower bound)
2014-01-01
Collection date (upper bound)
2014-12-31
Earliest release date
2016-06-01
Collection country
Russia
Isolate name
103-ROS/HU-2014
Data use terms
Data use terms
OPEN
✕
Data use terms history
Changed
User
Data use terms
2026-02-06 07:31
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://#TODO-MVP/open
Authors
Author affiliations
Stavropol State Research Anti-Plague Institute, Laboratory of Natural-Focal Infections
INSDC
NCBI release date
2016-06-01
INSDC accession L
KR821656.1
INSDC accession S
KR815146.1
Host
Host taxon id
9606
Host name scientific
Homo sapiens
Alignment and QC metrics L
Length L
437
Total SNPs L
41
Total inserted nucs L
0
Total deleted nucs L
0
Total ambiguous nucs L
0
Total unknown nucs L
0
Total frame shifts L
0
Completeness L
3.61%
Total stop codons L
0
Alignment and QC metrics S
Length S
538
Total SNPs S
82
Total inserted nucs S
0
Total deleted nucs S
0
Total ambiguous nucs S
0
Total unknown nucs S
0
Total frame shifts S
0
Completeness S
32.18%
Total stop codons S
0
Submission details
Submission ID
KR821656.1.L/KR815146.1.S
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-02-06 07:31:19 UTC
Date released
2026-02-06 07:34:18 UTC
Lineage
Segment S Lineage
V
Files
Annotations
LOC_001FMDQ.1.embl
Nucleotide mutations
Mutations called relative to the
NC_005301.3
,
NC_005300.2
&
NC_005302.1
references
Substitutions
L
L:
T
131
A
L:
C
148
T
L:
T
151
C
L:
T
154
C
L:
T
160
C
L:
T
163
C
L:
T
202
C
L:
C
205
T
L:
T
229
C
L:
A
240
C
L:
T
241
C
L:
T
253
C
L:
T
254
A
L:
G
264
A
L:
C
265
T
L:
A
268
G
L:
C
276
T
L:
C
284
A
Show more
S
S:
C
115
T
S:
G
134
A
S:
C
142
T
S:
T
157
C
S:
C
166
T
S:
G
171
A
S:
T
175
A
S:
C
178
A
S:
T
182
C
S:
C
187
T
S:
G
189
A
S:
T
199
C
S:
T
211
C
S:
C
217
T
S:
C
244
T
S:
T
250
G
S:
G
262
A
S:
A
268
C
Show more
Deletions
None
Insertions
None
Amino acid mutations
Mutations called relative to the
NC_005301.3
,
NC_005300.2
&
NC_005302.1
references
Substitutions
NP
NP:
V
27
M
NP:
S
39
N
NP:
R
45
K
NP:
A
100
S
NP:
S
109
N
NP:
T
111
A
NP:
T
124
A
NP:
G
125
N
NP:
H
195
R
NP:
D
199
E
RdRp
RdRp:
S
19
T
RdRp:
D
55
A
RdRp:
Y
60
N
RdRp:
R
63
H
RdRp:
S
67
L
RdRp:
R
80
K
Deletions
None
Insertions
None
L (unaligned)
M (unaligned)
S (unaligned)
L (aligned)
M (aligned)
S (aligned)
Aligned amino acid sequences
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