This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_001ECXY.1

Turkey/LOC_001ECXY.1/2012
A. Papa, D. Yagci-Caglayik, Y. Uyar, S. Pappa & G. Korukluoglu

Aristotle University of Thessaloniki, A' Dept. of Microbiology

Sample details

Collection date
2012
Earliest release date
2015-12-01
Sampling location
Turkey
Isolate name
Turkey/Corum 22-2012

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2015-12-01
INSDC accession S

Host

Host

Submission details

Submission ID
KR059958.1.S
Submitting group
Date submitted
2026-09-09 16:36:40 UTC
Date released
2026-09-09 16:38:44 UTC

Lineage

Segment S Lineage
V

Files

Annotations

Alignment and QC

Total SNPs S
76
Length S
517 (30.9%)

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • G99A
  • G100A
  • A109G
  • C115T
  • A121G
  • G134A
  • C142T
  • T157C
  • C166T
  • G171A
  • T175A
  • C178A
  • T182C
  • C187T
  • G189A
  • T199C
  • T211C
  • C217T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

NP

  • NP:R15K
  • NP:V27M
  • NP:S39N
  • NP:R45K
  • NP:A100S
  • NP:S109N
  • NP:T111A
  • NP:T124A
  • NP:G125N
Deletions
N/A
Insertions
N/A

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