This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_001D46R.1

Display Name: Norway/LOC_001D46R.1/2019-06-22
M. Bisseux, A. Mirand, C. Henquell, J.-L. Bailly, E. Toverud Landaas & S. Dudman

Sample details

Collection date
2019-06-22
Collection date (lower bound)
2019-06-22
Collection date (upper bound)
2019-06-22
Earliest release date
2025-04-12
Collection country
Norway
Isolate name
S18_OUH17_C1_OSL_NOR_22_06_2019

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-11-10 19:06insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Oslo University Hospital, Dept. of Microbiology

INSDC

NCBI release date
2025-04-12
INSDC accession EV-A71

Host

Host taxon id
Host name scientific
Homo sapiens

Alignment and QC metrics EV-A71

Length EV-A71
300
Total SNPs EV-A71
50
Total inserted nucs EV-A71
0
Total deleted nucs EV-A71
0
Total ambiguous nucs EV-A71
0
Total unknown nucs EV-A71
0
Total frame shifts EV-A71
0
Completeness EV-A71
4.05%

Submission details

Submission ID
PQ284521.1.EV-A71
Submitting group
Date submitted
2025-11-10 19:05:27 UTC
Date released
2025-11-10 19:51:36 UTC

Clade

Clade EV-A71
C1-like

Genotype

Genotype
EV-A71

Files

Annotations

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions

  • T2600A
  • G2603A
  • G2606A
  • T2609C
  • T2618C
  • T2636A
  • T2648C
  • C2651T
  • T2657C
  • A2669G
  • C2672T
  • C2675T
  • T2678C
  • A2696G
  • A2699G
  • C2702G
  • A2705G
  • T2720C
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the U22521.1 reference

    Substitutions
    Deletions
    None
    Insertions
    None

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