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LOC_001AU75.1
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Download FASTA
Download metadata TSV
United_Kingdom/LOC_001AU75.1/2017-10-19
M. Majumdar &
J. Martin
National Institute for Biological Standards and Control, Virology
Sample details
Collection date
2017-10-19
Earliest release date
2021-02-10
Sampling location
United Kingdom
Isolate name
CLI-B1-36-EV-D68
Data use terms
Data use terms
OPEN
✕
Data use terms history
Changed
User
Data use terms
2026-03-16 20:53
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://#TODO-MVP/open
INSDC
NCBI release date
2021-02-10
NCBI update date
2021-02-10
INSDC accession
MT641384.1
Host
Host
Homo sapiens
Submission details
Submission ID
MT641384.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-03-16 20:52:16 UTC
Date released
2026-03-16 21:03:48 UTC
Clade
Clade EV-D68
A2/D
Genotype
Genotype
EV-D68
Alignment and QC
Total SNPs
505
Total inserted nucs
6
Total deleted nucs
3
Total ambiguous nucs
3
Length
3836 (52%)
Variant
False
Nucleotide mutations
Mutations called relative to the
AY426531.1
reference
Substitutions
A
738
G
T
762
C
T
768
C
T
780
C
C
801
T
T
807
C
G
834
A
T
837
C
A
846
G
C
855
T
C
858
T
G
861
A
C
867
T
G
876
A
T
879
C
C
891
T
A
927
T
A
939
G
Show more
Deletions
2806-2808
Insertions
ins_3303:ATCCGG
Amino acid mutations
Mutations called relative to the
AY426531.1
reference
Substitutions
2A
2A:
I
22
T
2A:
R
67
K
2A:
I
71
V
2A:
V
144
A
2B
2B:
N
23
S
2B:
I
64
V
2C
2C:
N
30
S
2C:
T
34
N
2C:
K
58
S
2C:
R
72
Q
2C:
R
88
K
2C:
S
98
A
2C:
A
102
T
2C:
I
154
V
VP1
VP1:
S
1
L
VP1:
N
2
E
VP1:
G
6
E
VP1:
V
13
I
VP1:
I
17
M
VP1:
T
46
S
VP1:
G
76
S
VP1:
K
84
R
VP1:
A
92
T
VP1:
S
95
E
VP1:
G
97
R
VP1:
T
98
V
VP1:
H
99
D
VP1:
F
103
Y
VP1:
N
142
S
VP1:
D
144
N
VP1:
K
168
E
VP1:
E
169
K
Show more
VP2
VP2:
S
59
A
VP2:
R
67
K
VP2:
S
73
T
VP2:
N
74
E
VP2:
Y
98
H
VP2:
D
136
N
VP2:
N
144
D
VP2:
R
151
E
VP2:
I
167
L
VP2:
V
195
A
VP2:
M
222
V
VP2:
V
225
M
VP2:
T
247
A
VP3
VP3:
I
40
V
VP3:
M
46
V
VP3:
D
59
E
VP3:
G
60
N
VP3:
N
62
V
VP3:
E
65
Q
VP3:
R
68
K
VP3:
Q
74
L
VP3:
A
75
T
VP3:
L
77
V
VP3:
I
153
V
VP3:
I
163
V
VP3:
I
166
V
VP3:
S
180
N
VP3:
S
204
N
VP3:
D
208
N
VP3:
I
216
V
Deletions
VP1
VP1:140
Insertions
VP1
ins_VP1:306:RL
Nucleotide sequence
Aligned nucleotide sequence
Aligned amino acid sequences
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