This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_0019XBW.1

Viet_Nam/LOC_0019XBW.1/2023-06-16
C. V. V. Nguyen, T. C. Tang, H. T. Nguyen, H. T. T. Nguyen, Q. T. Du, T. B. Tran, H. M. Cao, M. N. Q. Ngo, K. H. Truong, H. D. K. Do, T. H. C. Truong, N. T. H. Nguyen, T. K. Le, N. A. Lam, T. T. Cao, N. N. T. Le, Q. V. Pham, N. N. T. Phung, Q. T. Phan, H. van Doorn, L. Thwaites, T. T. Tran, D. T. Nguyen, G. Thwaites, A. T. Nguyen & T. V. Le

Oxford University Clinical Research Unit, Emerging Infections

Sample details

Collection date
2023-06-16
Earliest release date
2023-11-21
Sampling location
Viet Nam
Isolate name
VN14-2023/EV-A71/B5

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-05 16:08insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2023-11-21
NCBI update date
2023-11-21
INSDC accession

Host

Host

Submission details

Submission ID
OR766718.1
Submitting group
Date submitted
2026-03-05 16:08:27 UTC
Date released
2026-03-05 16:23:00 UTC

Clade

Clade EV-A71
B5

Genotype

Genotype
EV-A71

Alignment and QC

Total SNPs
122
Length
657 (8.87%)
Variant
False

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions

  • C2495G
  • C2503G
  • A2504G
  • T2507C
  • T2508C
  • A2510T
  • T2513G
  • A2516G
  • C2519T
  • C2525A
  • C2527A
  • G2529A
  • C2531T
  • C2534A
  • A2537G
  • C2552A
  • T2553C
  • T2561C
Deletions
N/A
Insertions
N/A

Amino acid mutations

Mutations called relative to the U22521.1 reference

Substitutions

VP1

  • VP1:P22R
  • VP1:P30Q
  • VP1:D31N
  • VP1:K43E
  • VP1:A58T
  • VP1:K98E
  • VP1:R145E
  • VP1:D167E
  • VP1:P172Q
  • VP1:S183L
  • VP1:S184T
Deletions
N/A
Insertions
N/A

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