This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_0019RXV.1

Spain/LOC_0019RXV.1/2018-09-22
B. Mengual-Chulia, L. Cano & F. Lopez Labrador

Fundacion para el Fomento de la Investigacion Sanitaria y Biomedica de la Comunitat Valenciana (FISABIO), Virology Laboratory. Genomics and Health Area

Sample details

Collection date
2018-09-22
Earliest release date
2024-10-07
Sampling location
Spain (Comunidad Valenciana, Valencia)
Isolate name
10_0086_20180922

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2024-10-07
NCBI update date
2024-10-07
INSDC accession

Host

Host

Submission details

Submission ID
OQ933693.1
Submitting group
Date submitted
2026-09-09 16:34:30 UTC
Date released
2026-09-09 16:46:10 UTC

Clade

Clade EV-D68
A2/D

Genotype

Genotype
EV-D68

Alignment and QC

Total SNPs
63
Total deleted nucs
3
Length
680 (9.27%)

Nucleotide mutations

Mutations called relative to the AY426531.1 reference

Substitutions
  • A2376T
  • T2379C
  • A2388G
  • T2389C
  • C2390T
  • A2392G
  • C2394A
  • C2397T
  • G2405A
  • A2406G
  • T2421C
  • G2427T
  • T2433C
  • C2436T
  • A2442G
  • T2451C
  • T2454C
  • G2463A
Deletions
2806-2808
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the AY426531.1 reference

Substitutions

VP1

  • VP1:S1L
  • VP1:N2E
  • VP1:G6E
  • VP1:T46S
  • VP1:G76S
  • VP1:K84R
  • VP1:A92T
  • VP1:S95E
  • VP1:G97R
  • VP1:T98V
  • VP1:H99D
  • VP1:F103Y
  • VP1:N142S
  • VP1:D144N
  • VP1:K168E
  • VP1:E169K
  • VP1:I187V
  • VP1:M194R
Deletions

VP1

VP1:140
Insertions
N/A

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