This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_0017JCB.1

LOC_0017JCB.1
P. M. Huelsmann & H. Knoetgen

Sample details

Earliest release date
2018-07-31

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-05-20 16:24insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2018-07-31
NCBI update date
2018-07-31
INSDC accession

Host

Host

Submission details

Submission ID
MA161859.1
Submitting group
Date submitted
2026-05-20 16:23:28 UTC
Date released
2026-05-20 16:31:12 UTC

Clade

Clade EV-A71
C2

Genotype

Genotype
EV-A71

Alignment and QC

Total SNPs
114
Total inserted nucs
2
Total deleted nucs
5
Length
655 (8.88%)

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions

  • A89G
  • C90G
  • C92G
  • C94G
  • T95C
  • T99C
  • T102A
  • T103G
  • A118T
  • C122T
  • C126T
  • T138C
  • A146G
  • T149C
  • G157A
  • C158T
  • T160C
  • A180T
Deletions

105, 106, 119, 120, 738
Insertions

ins_128:AC

Amino acid substitutions

Substitutions called relative to the U22521.1 reference

Substitutions

VP4

  • VP4:M1N
Deletions
N/A
Insertions
N/A

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