This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_0017GH2.1

Pakistan/LOC_0017GH2.1/2022
S. M. Chohan, N. Jamil, W. H. Naqvi & S. Khan

Centers of Excellence in Sciences and Applied Technology, Molecular Biology Division

Sample details

Collection date
2022
Earliest release date
2024-05-23
Sampling location
Pakistan
Isolate name
CCHFV-M20-2022-2

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-10 18:00insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2024-05-23
INSDC accession S

Submission details

Submission ID
PP801023.1.S
Submitting group
Date submitted
2026-03-10 17:59:28 UTC
Date released
2026-03-10 18:05:41 UTC

Host

Host

Files

Annotations

Alignment and QC

Total SNPs S
54
Length S
477 (26.4%)
Variant S
False

Nucleotide mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

S segment

  • G1017C
  • G1020C
  • G1023A
  • C1029T
  • C1032T
  • C1035T
  • C1039T
  • G1047A
  • A1056G
  • T1059C
  • T1062C
  • T1080A
  • G1083C
  • C1089T
  • A1113G
  • A1122G
  • C1125T
  • T1128C
Deletions
N/A
Insertions
N/A

Amino acid mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

NP

  • NP:Q405L
  • NP:R428K
Deletions
N/A
Insertions
N/A

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