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LOC_0017FKZ.1
Download
Download FASTA
Download metadata TSV
Spain/LOC_0017FKZ.1/2015
S. Baz-Flores,
G. Herrero,
R. Cuadrado-Matias,
A. Moraga Fernandez,
A. Peralbo-Moreno,
I. G. Fernandez de Mera &
F. Ruiz-Fons
Instituto de Investigacion en Recursos Cinegeticos, Sanidad Animal
Sample details
Collection date
2015
Earliest release date
2024-03-16
Sampling location
Spain
Isolate name
860
Data use terms
Data use terms
OPEN
✕
Data use terms history
Changed
User
Data use terms
2026-03-10 18:00
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://#TODO-MVP/open
INSDC
NCBI release date
2024-03-16
INSDC accession S
PP449386.1
Submission details
Submission ID
PP449386.1.S
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-03-10 17:59:28 UTC
Date released
2026-03-10 18:05:41 UTC
Host
Host
Hyalomma lusitanicum
Files
Annotations
LOC_0017FKZ.1.embl
Alignment and QC
Total SNPs S
34
Length S
212 (12.6%)
Variant S
False
Nucleotide mutations
Mutations called relative to the
NC_005301.3
&
MK299338.1
references
Substitutions
S segment
G
264
A
A
282
C
G
291
A
T
303
C
A
312
C
A
315
C
A
321
G
A
327
G
T
330
G
A
348
G
C
351
T
A
352
T
A
355
G
C
357
A
G
366
A
G
380
A
C
384
T
A
385
G
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Deletions
N/A
Insertions
N/A
Amino acid mutations
Mutations called relative to the
NC_005301.3
&
MK299338.1
references
Substitutions
NP
NP:
T
100
S
NP:
S
101
G
NP:
S
109
N
NP:
T
111
A
NP:
I
117
V
NP:
S
124
A
NP:
S
125
N
NP:
Y
126
C
Deletions
N/A
Insertions
N/A
L (unaligned)
S (unaligned)
L (aligned)
S (aligned)
Aligned amino acid sequences
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