This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_00179RT.1

Germany/LOC_00179RT.1/2014-05
S. Baertl, C. Pietsch, M. Maier, M. Honemann, S. Bergs, U. G. Liebert & S. Bartl

Leipzig University Hospital, Institute of Medical Microbiology and Virology

Sample details

Collection date
2014-05
Earliest release date
2021-07-14
Sampling location
Germany
Isolate name
CVA16/human/Germany/LE-A41EXX7/2014

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2021-07-14
NCBI update date
2021-07-14
INSDC accession

Host

Host

Submission details

Submission ID
MW731917.1
Submitting group
Date submitted
2026-09-09 16:34:26 UTC
Date released
2026-09-09 16:45:10 UTC

Clade

Clade CV-A16
B1b

Genotype

Genotype
CV-A16

Alignment and QC

Total SNPs
61
Length
283 (3.82%)

Nucleotide mutations

Mutations called relative to the U05876.1 reference

Substitutions
  • C2607G
  • T2610G
  • A2619T
  • C2620A
  • A2621G
  • G2622T
  • G2626A
  • T2634C
  • A2637T
  • A2640G
  • C2643T
  • C2644A
  • G2646A
  • T2670G
  • C2679A
  • A2680G
  • G2682C
  • C2688G
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the U05876.1 reference

Substitutions

VP1

  • VP1:Q59S
  • VP1:E61K
  • VP1:T79A
  • VP1:M119L
  • VP1:A139V
Deletions
N/A
Insertions
N/A

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