This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000QQGX.1

Viet_Nam/21/2017-01-01
V. V. Ternovoy, E. P. Ponomareva, N. L. Tupota, R. B. Bayandin, M. Y. Kartashov, V. Y. Marchenko, A. N. Shvalov, V. B. Loktev & T. T. Nhai

SRC VB Vector, Molecular virology

Sample details

Collection date
2017
Earliest release date
2023-04-26
Sampling location
Viet Nam
Isolate name
21

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2023-04-26
NCBI update date
2023-04-26
INSDC accession

Host

Host

Submission details

Submission ID
OP593327.1
Submitting group
Date submitted
2026-07-20 09:55:47 UTC
Date released
2026-07-20 10:14:12 UTC

Lineage

Lineage
1A

Files

Annotations

Alignment and QC

Total SNPs
13
Length
242 (2.19%)
Amino Acid Mutations from founder clade
  • NS1:T163S
  • NS1:S181A
  • NS1:I194V
  • NS1:E203G
Variant
True

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions
  • A2946C
  • T2952C
  • A2956T
  • T2964C
  • T3010G
  • T3021C
  • A3049G
  • A3077G
  • C3087T
  • A3114G
  • T3138C
  • G3141A
  • T3156C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_009942.1 reference

Substitutions

NS1

  • NS1:T163S
  • NS1:S181A
  • NS1:I194V
  • NS1:E203G
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue