This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000QMV7.1

Tunisia/TE_27140/2016-01-01
F. Monaco & F. Valleriani

Istituto Zooprofilattico Sperimentale dell'Abruzzo e del Molise 'G. Caporale', Animals Foreign Diseases

Sample details

Collection date
2016
Earliest release date
2022-12-13
Sampling location
Tunisia
Isolate name
TE_27140

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2022-12-13
NCBI update date
2022-12-13
INSDC accession

Host

Host

Submission details

Submission ID
OM728607.1
Submitting group
Date submitted
2026-07-20 09:55:47 UTC
Date released
2026-07-20 10:14:12 UTC

Lineage

Lineage
1A

Files

Annotations

Alignment and QC

Total SNPs
54
Length
1086 (9.85%)
Variant
True

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions
  • G5226A
  • C5238T
  • G5280A
  • C5286T
  • A5316C
  • C5317T
  • C5331T
  • C5340T
  • C5349T
  • A5352C
  • C5356A
  • T5367C
  • T5397C
  • T5403C
  • C5412T
  • G5442C
  • C5451T
  • C5457T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_009942.1 reference

Substitutions

NS3

  • NS3:P249T
  • NS3:T356I
Deletions
N/A
Insertions
N/A

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