This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000QD7S.1

Nigeria/LOC_000QD7S.1/1966
L. Peng, S. Hirsch, G. Kocher, M. Mehta & M. Holbrook

NIH/NIAID, IRF

Sample details

Collection date
1966
Earliest release date
2024-11-09
Sampling location
Nigeria
Isolate name
CCHFV_IRF414_L

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-06-09 07:35insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2024-11-09
INSDC accession L segment

Host

Host
Is lab host
True

Submission details

Submission ID
PQ463982.1.L
Submitting group
Date submitted
2026-06-09 07:35:01 UTC
Date released
2026-06-09 07:39:42 UTC

Clade & Lineage

Closest reference L segment
singleReference

Files

Annotations

Alignment and QC

Total SNPs L segment
8
Length L segment
12068 (99.7%)

Nucleotide mutations

Mutations called relative to the NC_005301.3 reference

Substitutions

L segment

  • G3216A
  • C4117A
  • C5054A
  • T5065A
  • C5100A
  • C5798T
  • A5830T
  • T5875C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3 reference

Substitutions

RdRp

  • RdRp:G1047E
  • RdRp:P1660T
  • RdRp:T1675N
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue