This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000MK06.1

Display Name: Viet_Nam/LOC_000MK06.1/2020
N. L. Tupota, R. B. Bayandin, K. V. Karelina, S. E. Pashkovskii, V. A. Ternovoi & N. T. Tran

Sample details

Collection date
2020
Collection date (lower bound)
2020-01-01
Collection date (upper bound)
2020-12-31
Earliest release date
2025-03-29
Collection country
Viet Nam
Isolate name
980/Vietnam/2020

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-12-05 17:40insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
State Research Center of Virology and Biothechnology Vector, Departament of Molecular Virology for Flaviviruses and Viral Hepatitis

INSDC

NCBI release date
2025-03-29
NCBI update date
2025-03-29
INSDC accession

Host

Host taxon id
Host name scientific
Aves

Alignment and QC metrics

Length
131
Total SNPs
3
Total inserted nucs
0
Total deleted nucs
0
Total ambiguous nucs
0
Total unknown nucs
0
Total frame shifts
0
Frame shifts
[]
Completeness
1.19%
Stop codons
[]
Total stop codons
0

Submission details

Submission ID
PV259849.1
Submitting group
Date submitted
2025-12-05 17:40:35 UTC
Date released
2025-12-05 18:05:53 UTC

Lineage

Lineage
1A

Files

Annotations

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions

  • T9108A
  • G9147A
  • C9171T
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_009942.1 reference

    Substitutions
    Deletions
    None
    Insertions
    None

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