This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000MJZ8.1

Display Name: Mali/LOC_000MJZ8.1/2024-07-22
K. Ergunay

Sample details

Collection date
2024-07-22
Collection date (lower bound)
2024-07-22
Collection date (upper bound)
2024-07-22
Earliest release date
2025-10-22
Collection country
Mali
Isolate name
THB174

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-12-05 17:40insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Smithsonian Institution, Department of Entomology, Walter Reed Biosystematics Unit

INSDC

NCBI release date
2025-10-22
NCBI update date
2025-10-22
INSDC accession

Host

Host taxon id
Host name scientific
Culicidae

Alignment and QC metrics

Length
951
Total SNPs
39
Total inserted nucs
0
Total deleted nucs
0
Total ambiguous nucs
0
Total unknown nucs
0
Total frame shifts
0
Frame shifts
[]
Completeness
8.62%
Stop codons
[]
Total stop codons
0

Submission details

Submission ID
PV256528.1
Submitting group
Date submitted
2025-12-05 17:40:35 UTC
Date released
2025-12-05 18:05:53 UTC

Lineage

Lineage
1A

Files

Annotations

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions

  • G9147A
  • T9156C
  • C9171T
  • A9228G
  • G9261A
  • T9264C
  • T9279C
  • T9285C
  • C9453T
  • T9465C
  • G9534A
  • G9573A
  • A9597G
  • A9606G
  • A9612G
  • A9654G
  • T9678C
  • T9690C
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_009942.1 reference

    Substitutions

    NS5

  • NS5:W800C
    • Deletions
    None
    Insertions
    None

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