This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000MHVH.1

Spain/LOC_000MHVH.1/2024-07-31
M. Aguero, R. Villalba, M. J. Ruano, A. Lopez & B. Gomez

Laboratorio Central de Veterinaria - Ministerio de Agricultura, Pesca y Alimentacion

Sample details

Collection date
2024-07-31
Earliest release date
2025-03-08
Sampling location
Spain (Andalusia)
Isolate name
SPA/2723-21/2024/brain

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-04-16 08:45insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2025-03-08
NCBI update date
2025-03-08
INSDC accession

Host

Host

Submission details

Submission ID
PV089519.1
Submitting group
Date submitted
2026-04-16 08:45:43 UTC
Date released
2026-04-16 09:30:05 UTC

Lineage

Lineage
2

Files

Annotations

Alignment and QC

Total SNPs
30
Total deleted nucs
110
Total frame shifts
1
Frame shifts
NS5:465-905(nt:9071-10395)
Length
174 (2.58%)
Variant
True

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions

  • C9072T
  • A9084C
  • G9087A
  • C9090T
  • G9093A
  • A9096C
  • C9123A
  • A9126G
  • T9129C
  • T9135C
  • C9144T
  • G9147A
  • G9153C
  • T9156A
  • T9159C
  • T9180G
  • A9183T
  • A9186G
Deletions

8961-9070
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_009942.1 reference

Substitutions
N/A
Deletions

NS5

NS5:428-464
Insertions
N/A

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