This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000MDM3.1

Tunisia/LOC_000MDM3.1/2022-10-10
C. Badr & I. Larbi

Institut Pasteur de Tunis, Labortory of Epidemiology and Veterinary Microbiology

Sample details

Collection date
2022-10-10
Earliest release date
2026-05-05
Sampling location
Tunisia
Isolate name
749/2022

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-05-18 16:40insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2026-05-05
NCBI update date
2026-05-05
INSDC accession

Host

Host

Submission details

Submission ID
PQ219713.1
Submitting group
Date submitted
2026-05-18 16:40:00 UTC
Date released
2026-05-18 16:59:57 UTC

Lineage

Lineage
1A

Files

Annotations

Alignment and QC

Total SNPs
15
Length
393 (3.56%)
Variant
True

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions

  • C1422T
  • G1441A
  • A1446G
  • C1465T
  • C1470T
  • G1521A
  • A1527C
  • A1542G
  • A1566C
  • C1599T
  • T1681C
  • C1707T
  • G1710A
  • T1776C
  • T1788C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_009942.1 reference

Substitutions

env

  • env:V159I
  • env:L167F
Deletions
N/A
Insertions
N/A

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