This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000MDCN.1

Tunisia/LOC_000MDCN.1/2020-01-21
I. Larbi, C. badr & C. Badr

Institut Pasteur de Tunis, Labortory of Epidemiology and Veterinay Microbiology

Sample details

Collection date
2020-01-21
Earliest release date
2025-10-24
Sampling location
Tunisia
Isolate name
53/2020

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-06-10 12:19insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2025-10-24
NCBI update date
2025-10-24
INSDC accession

Host

Host

Submission details

Submission ID
PQ215111.1
Submitting group
Date submitted
2026-06-10 12:19:13 UTC
Date released
2026-06-10 12:40:46 UTC

Lineage

Lineage
1A

Files

Annotations

Alignment and QC

Total SNPs
8
Length
253 (2.29%)
Variant
True

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions

  • G1521A
  • A1527C
  • A1542G
  • A1566C
  • C1599T
  • T1681C
  • C1707T
  • G1710A
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_009942.1 reference

Substitutions
N/A
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue